Allele Frequency | HGVD

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Allele Frequency Allele Color Code:

:A

:G

:C

:T

:Others
Variation Color Code:

:nonsense, splice

:missense

:synonymous

:indel

:non-coding, intron, other

Variant position	rsID	Ref/Alt	Frequency of alternative allele	Genotype count			Number of Samples Covered	Average sample read depth	Alleles	Gene	mRNA Accession#	Function				Org	Platform
				Genotype count								Codon		AA
				Ref/Ref	Ref/Alt	Alt/Alt						Ref	Alt	Ref	Alt
chr2:219677420	rs144018609	G/A	0.0095	1188	21	1	1210	262.79±124.05	0.9905 0.0095	CYP27A1	NM_000784	GTG	GTA	Val	Val	All
chr2:219677420	rs144018609	G/A	0.0117	294	5	1	300	232.39±166.55	0.9883 0.0117	CYP27A1	NM_000784	GTG	GTA	Val	Val	KU	HiSeq + SOLiD
chr2:219677420	rs144018609	G/A	0.0058	424	5	0	429	248.76±13.23	0.9942 0.0058	CYP27A1	NM_000784	GTG	GTA	Val	Val	YCU	HiSeq
chr2:219677420	rs144018609	G/A	0.0357	65	5	0	70	326.79±71.8	0.9643 0.0357	CYP27A1	NM_000784	GTG	GTA	Val	Val	NCCHD	HiSeq
chr2:219677420	rs144018609	G/A	0.0132	37	1	0	38	548.45±212.01	0.9868 0.0132	CYP27A1	NM_000784	GTG	GTA	Val	Val	TU	HiSeq
chr2:219677420	rs144018609	G/A	0.0067	368	5	0	373	262.25±109.59	0.9933 0.0067	CYP27A1	NM_000784	GTG	GTA	Val	Val	UT	HiSeq