The 6th Kyoto Course on Bioinformatics for Genomic Medicine
Course on Computational Genomics – October 2nd-5th, 2018 Preliminary Schedule
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Day 1 (October 2) |
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9:00 – 9:15 |
Opening remarks & course overviews |
Fumihiko Matsuda & Mark Lathrop |
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9:15 – 10:45 |
Lecture: Introduction to human genetics |
Joseph D. Terwilliger |
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10:45 – 11:15 |
Coffee break |
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11:15 – 12:45 |
Lecture: Advances in SNP-array based genome-wide association study (GWAS) |
Yoichiro Kamatani |
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12:45 – 13:45 |
Lunch |
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13:45 – 15:15 |
Lecture: The UK Biobank resource for genetic epidemiology |
Jemma Hopewell |
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15:15 – 17:15 |
Practical: Genome-wide association studies |
Yoichiro Kamatani |
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Day 2 (October 3) |
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9:00 – 11:00 |
Lecture: Recent advances in NGS technologies |
Ioannis Ragoussis |
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11:00 – 11:15 |
Coffee break |
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11:15 – 12:15 |
Lecture: De novo assembling of human genomes |
Changhoon Kim |
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12:15 – 13:15 |
Lunch |
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13:15 – 14:45 |
Lecture: Understanding NGS data analysis workflow |
Mathieu Bourgey |
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14:45 – 15:00 |
Coffee break |
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15:00 – 17:00 |
Practical: NGS data manipulation & variant calling (SNV, CNV) |
Mathieu Bourgey |
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Day 3 (October 4) |
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9:00 – 10:30 |
Lecture: Cloud based tools for NGS analysis |
Mario Foglio |
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10:30 – 10:45 |
Coffee break |
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10:45 – 11:30 |
Lecture: GWAS in the age of NGS |
Yukinori Okada |
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11:30 – 12:15 |
Lecture: Human population genetics |
Ryan Hernandez |
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12:15 – 13:15 |
Lunch |
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13:15 – 14:45 |
Practical: Human population genetics |
Ryan Hernandez |
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14:45 – 15:00 |
Coffee break |
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15:00 – 17:30 |
Practical: Human population genetics |
Ryan Hernandez |
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Day 4 (October 5) |
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9:00 – 10:00 |
Lecture: Principles of Mendelian randomization |
Kaitlin Wade |
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10:00 – 10:15 |
Coffee break |
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10:15 – 12:45 |
Practical: Mendelian randomization |
Kaitlin Wade |
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12:45 – 13:45 |
Lunch |
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13:45 – 14:45 |
Lecture: Analysis of RNA-seq and epigenetic data |
Guillaume Bourque |
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14:45 – 15:45 |
Lecture: Applications to the analysis of cancer |
Nada Jabado |
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